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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast06G038200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 346aa MW: 38403.4 Da PI: 5.1612 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.5 | 4.2e-30 | 143 | 272 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknra......tksgyWkat 86 pG+rFhPtd el+ yL++k +g+++++ +++k++++++++P++ ++ + ++ + +wy F++r++ky++gkr+ r+ k gyWk+ Brast06G038200.1.p 143 PGVRFHPTDTELI-GYLRRKYDGRRMPA-DIVKDFNVFHHHPSSVQEiCGDSVDGSWYVFTPRSRKYEEGKRPDRSvvcegsRKIGYWKSN 231 9************.9*************.99**************95244445569*******************6566665569****** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ ++ + +g++vg + L+f g++p+ge t+W m+eyr+ Brast06G038200.1.p 232 VKEADISV-RGKVVGKVNALTFALGDQPRGELTRWRMKEYRM 272 *******9.999****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 34.378 | 141 | 311 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.01E-33 | 143 | 311 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.1E-16 | 143 | 272 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence Send to blast |
MTGRSLDADN VNAQPGAPLP VAPSSSFSLP LLPSSSWSST WQTPCGDELA AAPPAEPGNP 60 PAGRRRGRPR GSTNKPKVAN KAAAKPKPKL DSPSPGEERP TTGHPSTGAA TTPAVAGEEE 120 EEEEEEEEED WDSDEEYAAT DIPGVRFHPT DTELIGYLRR KYDGRRMPAD IVKDFNVFHH 180 HPSSVQEICG DSVDGSWYVF TPRSRKYEEG KRPDRSVVCE GSRKIGYWKS NVKEADISVR 240 GKVVGKVNAL TFALGDQPRG ELTRWRMKEY RMPDCQREPE RDPKRRKASR RNLGPDSMLL 300 DDWVICKLFY RRNKKDQEVD VGGQQDGEVN EDVDKEDDGK EGDTK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-26 | 143 | 317 | 17 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010229598.2 | 1e-118 | PREDICTED: uncharacterized protein LOC104582026 | ||||
Refseq | XP_014753160.1 | 1e-118 | PREDICTED: uncharacterized protein LOC104582026 | ||||
TrEMBL | A0A0Q3KUZ1 | 1e-118 | A0A0Q3KUZ1_BRADI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13130 | 21 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 3e-27 | NAC domain containing protein 32 |
Link Out ? help Back to Top | |
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Phytozome | Brast06G038200.1.p |